tahini.core package

Submodules

tahini.core.base module

class tahini.core.base.ContainerDataIndexed(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable]]] = None, data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, **kwargs)

Bases: collections.abc.Collection

property data: pandas.core.frame.DataFrame

property data_internal: pandas.core.frame.DataFrame

property data_testing: pandas.core.frame.DataFrame

drop(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable], pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, **kwargs) → tahini.core.base.TypeContainerDataIndexed

iter() → collections.abc.Iterable

map(mapper: Optional[Union[Callable, Dict, pandas.core.series.Series]] = None, **kwargs) → tahini.core.base.TypeContainerDataIndexed

property names_index: Sequence[str]

update(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable], pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, func: Optional[Callable] = None, **kwargs) → tahini.core.base.TypeContainerDataIndexed

class tahini.core.base.ContainerDataIndexedMulti(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, **kwargs)

Bases: tahini.core.base.ContainerDataIndexed

class tahini.core.base.ContainerDataIndexedMultiSets(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, **kwargs)

Bases: tahini.core.base.ContainerDataIndexedMulti

tahini.core.edges module

class tahini.core.edges.Edges(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, **kwargs)

Bases: tahini.core.base.ContainerDataIndexedMulti

get_positions(positions_nodes: pandas.core.frame.DataFrame, **kwargs) → pandas.core.frame.DataFrame

keep_nodes(nodes: Optional[Union[tahini.core.nodes.Nodes, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable]]] = None) → tahini.core.edges.TypeEdges

property nodes: tahini.core.nodes.Nodes

class tahini.core.edges.UndirectedEdges(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, **kwargs)

Bases: tahini.core.base.ContainerDataIndexedMultiSets, tahini.core.edges.Edges

tahini.core.graph module

class tahini.core.graph.Graph(nodes: Optional[Union[tahini.core.nodes.Nodes, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable]]] = None, edges: Optional[Union[tahini.core.edges.TypeEdges, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, order: Optional[int] = None, nodes_data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, edges_data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, **kwargs)

Bases: object

assign(nodes: Optional[Union[tahini.core.nodes.Nodes, Callable]] = None, edges: Optional[Union[tahini.core.edges.Edges, Callable]] = None) → tahini.core.graph.TypeGraph

classmethod complete(order: Optional[int] = None, nodes: Optional[tahini.core.nodes.Nodes] = None) → tahini.core.graph.TypeGraph

classmethod cycle(order: Optional[int] = None, nodes: Optional[tahini.core.nodes.Nodes] = None) → tahini.core.graph.TypeGraph

property degrees: pandas.core.frame.DataFrame

drop_edges(edges: Optional[Union[tahini.core.edges.TypeEdges, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, **kwargs) → tahini.core.graph.TypeGraph

drop_nodes(nodes: Optional[Union[tahini.core.nodes.Nodes, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable]]] = None, **kwargs) → tahini.core.graph.TypeGraph

property edges: tahini.core.edges.Edges

get_adjacency_matrix(weight: Optional[str] = None) → pandas.core.frame.DataFrame

map_nodes(mapper: Optional[Union[Callable, Dict, pandas.core.series.Series]] = None, **kwargs) → tahini.core.graph.TypeGraph

property neighbors: pandas.core.frame.DataFrame

property nodes: tahini.core.nodes.Nodes

property order: int

classmethod path(order: Optional[int] = None, nodes: Optional[tahini.core.nodes.Nodes] = None) → tahini.core.graph.TypeGraph

plot(*args, **kwargs)

property size: int

classmethod star(order: Optional[int] = None, nodes: Optional[tahini.core.nodes.Nodes] = None) → tahini.core.graph.TypeGraph

update_edges(edges: Optional[Union[tahini.core.edges.TypeEdges, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, **kwargs) → tahini.core.graph.TypeGraph

update_nodes(nodes: Optional[Union[tahini.core.nodes.Nodes, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable]]] = None, data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, **kwargs) → tahini.core.graph.TypeGraph

class tahini.core.graph.UndirectedGraph(nodes: Optional[Union[tahini.core.nodes.Nodes, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable]]] = None, edges: Optional[Union[tahini.core.edges.TypeEdges, tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.multi.MultiIndex, Iterable[Sequence[Hashable]]]] = None, order: Optional[int] = None, nodes_data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, edges_data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, **kwargs)

Bases: tahini.core.graph.Graph

tahini.core.nodes module

class tahini.core.nodes.Nodes(index: Optional[Union[tahini.core.base.TypeContainerDataIndexed, pandas.core.indexes.base.Index, Iterable[Hashable]]] = None, data: Optional[Union[pandas.core.frame.DataFrame, Dict, collections.abc.Iterable]] = None, order: Optional[int] = None, **kwargs)

Bases: tahini.core.base.ContainerDataIndexed

get_positions(layout: Optional[str] = None, center: Optional[Sequence] = None, dim: Optional[int] = None, **kwargs) → pandas.core.frame.DataFrame

Module contents